Amino acids, peptides, protein: Difference between revisions
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Amino acids have: | '''Amino''' '''acids''' have: | ||
* functional groups: NH2 COOH | * functional groups: NH2 COOH | ||
* units: amino acids linked by a peptide bond | * units: amino acids linked by a peptide bond | ||
Peptides | '''Peptides''': | ||
* 2-100 amino acids | * 2-100 amino acids | ||
Proteins | '''Proteins''': | ||
* > 100 amino acids | * > 100 amino acids | ||
== Amino acids == | == [[Amino Acids|Amino acids]] == | ||
Amino acids are the basic building blocks of proteins. Chemically, they are organic compounds connected to each other by a peptide bond. At least one primary amino group –NH 2 and at the same time at least one carboxyl group –COOH must be present in the amino acid. Chemically, they have substituted derivatives of carboxylic acids. | |||
Amino acids are the basic building blocks of proteins. Chemically, they are organic compounds connected to each other by a peptide bond. At least one primary amino group –NH 2 and at the same time at least one carboxyl group –COOH must be present in the amino acid. Chemically, they | |||
* 2–100 amino acids (monomers) – peptides | * 2–100 amino acids (monomers) – peptides | ||
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== Structure == | == Structure == | ||
* amino group ( -NH 2 , free, substituted) | * amino group (-NH 2, free, substituted) | ||
* carboxyl group ( -COOH ) | * carboxyl group (-COOH) | ||
* other functional groups | * other functional groups | ||
** hydroxyl -OH | ** hydroxyl -OH | ||
** sulfhydryl (mercapto group) -SH | ** sulfhydryl (mercapto group) -SH | ||
** sulphide -SR | ** sulphide -SR | ||
** guanidyl ( ) | ** guanidyl ([[File:Guanidyl.jpg]]) | ||
** phenyl etc. ( ) | ** phenyl etc. ([[File:Fenyl.jpg]]) | ||
== Classification == | == Classification == | ||
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* according to importance in human nutrition | * according to importance in human nutrition | ||
** essential = the human organism is unable to create them endogenously | ** essential = the human organism is unable to create them endogenously | ||
*** valine, leucine , isoleucine, phenylalanine , lysine , methionine , tryptophan , threonine | *** valine, leucine, isoleucine, phenylalanine, lysine, methionine, tryptophan, threonine | ||
** conditionally essential = essential in the absence of precursors or immaturity of enzymatic systems | ** conditionally essential = essential in the absence of precursors or immaturity of enzymatic systems | ||
*** arginine , histidine | *** arginine, histidine | ||
** completely non-essential | ** completely non-essential | ||
*** glycine , alanine , serine , cysteine , aspartic acid and asparagine, glutamic acid and glutamine, selenocysteine, tysorine, proline | *** glycine, alanine, serine, cysteine, aspartic acid and asparagine, glutamic acid and glutamine, selenocysteine, tysorine, proline | ||
{| class=" | {|width=70% style="background-color: #F0FFFF;text-align:left;margin-bottom:10px;border:1px solid #B0E2FF" | ||
|<big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Classification'''</big> | ||
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* 19 α-amino acid with a primary amino group (-NH 2) | |||
* 19 α-amino acid with a primary amino group (-NH 2 ) | |||
* 1 α-amino acid with a secondary amino group (-NH-) | * 1 α-amino acid with a secondary amino group (-NH-) | ||
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* aliphatic with an unsubstituted chain | * aliphatic with an unsubstituted chain | ||
** glycine | ** glycine , alanine , valine , leucine , isoleucine | ||
* aliphatic hydroxyamino acids | * aliphatic hydroxyamino acids | ||
** serine | ** serine , threonine | ||
* aliphatic sulfur | * aliphatic sulfur | ||
** cysteine | ** cysteine , methionine | ||
* with a carboxyl group in the side chain (monoaminodicarboxylic, acidic) | * with a carboxyl group in the side chain (monoaminodicarboxylic, acidic) | ||
** aspartic acid | ** aspartic acid , glutamic acid | ||
* their monoamides (with a carboxamide group in the side chain) | * their monoamides (with a carboxamide group in the side chain) | ||
** asparagine | ** asparagine , glutamine | ||
* with basic groups in the side chain | * with basic groups in the side chain | ||
** amino group | ** amino group | ||
** guanidyl group | ** guanidyl group | ||
** imidazoyl cycle | ** imidazoyl cycle | ||
** lysine | ** lysine , arginine , histidine | ||
* with an aromatic (heterocyclic) side chain | * with an aromatic (heterocyclic) side chain | ||
** phenylalanine | ** phenylalanine , tyrosine , tryptophan , proline | ||
According to the polarity of the side chain and its ionic form (in a neutral environment) | According to the polarity of the side chain and its ionic form (in a neutral environment) | ||
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|<big>Representatives</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Representatives'''</big> | ||
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== Derivatives of basic proteinogenic amino acids == | == Derivatives of basic proteinogenic amino acids == | ||
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==== N-substituted α-amino acids ==== | ==== N-substituted α-amino acids ==== | ||
* N-methylglycine (sarcosine) , N,N-dimethylglycine , N,N,N-trimethylglycine | * N-methylglycine (sarcosine), N,N-dimethylglycine, N,N,N-trimethylglycine | ||
* L-carnitine (3-hydroxy-4-trimethylaminobutyrate, vitamin Bt) | * L-carnitine (3-hydroxy-4-trimethylaminobutyrate, vitamin Bt) | ||
* ß-alanine (3-aminopropionic acid) , γ-aminobutyric (4-aminobutyric) acid ( GABA ) | * ß-alanine (3-aminopropionic acid), γ-aminobutyric (4-aminobutyric) acid (GABA) | ||
==== Sulfur amino acids ==== | ==== Sulfur amino acids ==== | ||
* S-alk(en)yl-L-cysteines , S-alk(en)yl-L-cysteine sulfoxides | * S-alk(en)yl-L-cysteines, S-alk(en)yl-L-cysteine sulfoxides | ||
==== Basic amino acids and related compounds ==== | ==== Basic amino acids and related compounds ==== | ||
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==== Aromatic amino acids ==== | ==== Aromatic amino acids ==== | ||
* tetraiodothyronine ( thyroxine ), R = R1 = R2 = R3 = I | * tetraiodothyronine (thyroxine), R = R1 = R2 = R3 = I | ||
* 3,4-dihydroxy-L-phenylalanine ( DOPA ) | * 3,4-dihydroxy-L-phenylalanine (DOPA) | ||
==== Essential amino acids ==== | ==== Essential amino acids ==== | ||
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|<big>Physico-chemical properties</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Physico-chemical properties'''</big> | ||
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== Physico-chemical properties == | == Physico-chemical properties == | ||
* acid-base ( pK and pI ) | * acid-base (pK and pI) | ||
* optical | * optical | ||
* sensory | * sensory | ||
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Dependence of the ionic forms of Gly on pH | Dependence of the ionic forms of Gly on pH | ||
cation (I 1 ) → amphion (I 2 ) → anion (I 3 ) | cation (I 1) → amphion (I 2) → anion (I 3) | ||
==== Optical properties ==== | ==== Optical properties ==== | ||
* Gly = exception | * Gly = exception | ||
* majority = chiral atom C α ... 2 optical isomers (enantiomers) | * majority = chiral atom C α... 2 optical isomers (enantiomers) | ||
* some 2 chiral centers... Ile, Thr, Hyp, CySSCy | * some 2 chiral centers... Ile, Thr, Hyp, CySSCy | ||
L- and D-amino acids , L-amino acids = (S)-stereoisomers, ''exception'' : L-cysteine = (R)-stereoisomer | L- and D-amino acids, L-amino acids = (S)-stereoisomers, ''exception'' : L-cysteine = (R)-stereoisomer | ||
D-amino acids = (R)-stereoisomers | D-amino acids = (R)-stereoisomers | ||
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== Peptides == | == [[Peptides (1. LF UK, NT)|Peptides]] == | ||
=== Structure === | === Structure === | ||
* condensation ( amino acids -› peptides ) | * condensation (amino acids -› peptides) | ||
* binding of some amino acids in an unusual way (Glu distal group COOH = γ-peptide bond) | * binding of some amino acids in an unusual way (Glu distal group COOH = γ-peptide bond) | ||
* bound D-amino acids | * bound D-amino acids | ||
* unusual amino acids bound | * unusual amino acids bound | ||
** ß-alanine (3-aminopropionic) , α-aminobutyric (2-aminobutyric) , γ-aminobutyric (4-aminobutyric) , taurine | ** ß-alanine (3-aminopropionic), α-aminobutyric (2-aminobutyric), γ-aminobutyric (4-aminobutyric), taurine , 2-aminoacrylic (dehydroalanine), (E)-2-aminocrotonic (dehydrobutyrin), pyroglutamic | ||
=== Classification === | === Classification === | ||
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==== β-alanylhistidine dipeptides ==== | ==== β-alanylhistidine dipeptides ==== | ||
* carnosine | * carnosine , anserine , balenin | ||
Occurrence | Occurrence | ||
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==== Synthetic peptides ==== | ==== Synthetic peptides ==== | ||
* substitute sweetener Aspartame (Asp-Phe) | * substitute sweetener Aspartame (Asp-Phe) | ||
== Proteins == | == [[Proteins (1. LF UK, NT)|Proteins]] == | ||
Proteins , or polypeptides, are organic macromolecular substances. Their molecular weight exceeds 10,000. They consist of more than 100 amino acids . A typical protein contains 200-300 of them. | Proteins, or polypeptides, are organic macromolecular substances. Their molecular weight exceeds 10,000. They consist of more than 100 amino acids. A typical protein contains 200-300 of them. | ||
=== Building === | === Building === | ||
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The amino acids in a peptide are linked to each other by a peptide bond. A peptide bond connects the amino group of one amino acid and the carboxyl group of another amino acid by a simple covalent bond. The value of the Gibbson energy of this reaction is equal to G = 10 kJ/mol. | The amino acids in a peptide are linked to each other by a peptide bond. A peptide bond connects the amino group of one amino acid and the carboxyl group of another amino acid by a simple covalent bond. The value of the Gibbson energy of this reaction is equal to G = 10 kJ/mol. | ||
Polycondensation creates an arbitrarily long chain of amino acids . The end of the chain that has a free (unreacted) amino group is called the N-terminus . On the opposite side of the chain we find a free carboxyl group. This end is called the C-end . | Polycondensation creates an arbitrarily long chain of amino acids. The end of the chain that has a free (unreacted) amino group is called the N-terminus. On the opposite side of the chain we find a free carboxyl group. This end is called the C-end. | ||
==== Structure ==== | ==== Structure ==== | ||
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β-folded sheet | β-folded sheet | ||
By secondary structure we mean the spatial arrangement of amino acids in the chain and stabilization by hydrogen bridges . | By secondary structure we mean the spatial arrangement of amino acids in the chain and stabilization by hydrogen bridges. | ||
: There are two basic secondary structures: | : There are two basic secondary structures: | ||
# α-helix: The chain is twisted into a right-handed helix . The length of one turn of the helix is equal to 3.6 amino acid residues. The α-helix structure can be found mainly in fibrous proteins ( keratins ) or muscle proteins. | # α-helix: The chain is twisted into a right-handed helix. The length of one turn of the helix is equal to 3.6 amino acid residues. The α-helix structure can be found mainly in fibrous proteins (keratins) or muscle proteins. | ||
# β-folded sheet: Two parallel and antiparallel arranged chains resembling a folded sheet of paper. | # β-folded sheet: Two parallel and antiparallel arranged chains resembling a folded sheet of paper. | ||
; Tertiary structure | ; Tertiary structure | ||
Tertiary structure is characterized by additional intramolecular bonding interactions . For example, disulfide bonds , ionic bonds and van der Waals forces. Additional H-bonds can also form in the molecule. | Tertiary structure is characterized by additional intramolecular bonding interactions. For example, disulfide bonds, ionic bonds and van der Waals forces. Additional H-bonds can also form in the molecule. | ||
; Quaternary structure | ; Quaternary structure | ||
Quaternary structure occurs in proteins that consist of two or more polypeptide chains. Their connection is ensured by mutual extramolecular bonding interactions . Quaternary structure can be found, for example, in hemoglobin . Conversely, myoglobin does not have a quaternary structure. | Quaternary structure occurs in proteins that consist of two or more polypeptide chains. Their connection is ensured by mutual extramolecular bonding interactions. Quaternary structure can be found, for example, in hemoglobin. Conversely, myoglobin does not have a quaternary structure. | ||
==== Denaturation of proteins ==== | ==== Denaturation of proteins ==== | ||
Protein denaturation is a process where the secondary and tertiary structure changes. The protein thus loses its biological activity. Denaturation can be achieved, for example, by heating or changing the pH . | Protein denaturation is a process where the secondary and tertiary structure changes. The protein thus loses its biological activity. Denaturation can be achieved, for example, by heating or changing the pH. | ||
=== Major nutrients === | === Major nutrients === | ||
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** water | ** water | ||
** inorganic ions | ** inorganic ions | ||
** lipids , sugars , nucleic acids , colored compounds | ** lipids, sugars, nucleic acids, colored compounds | ||
{| class=" | {|width=70% style="background-color: #F0FFFF;text-align:left;margin-bottom:10px;border:1px solid #B0E2FF" | ||
|<big>Classification</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Classification'''</big> | ||
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=== Division === | === Division === | ||
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==== By function ==== | ==== By function ==== | ||
* structural (building components of cells, collagen ) | * structural (building components of cells, collagen) | ||
* catalytic ( enzymes , hormones ) | * catalytic (enzymes, hormones) | ||
* transport (transfer of compounds, myoglobin ) | * transport (transfer of compounds, myoglobin) | ||
* movement (muscle proteins, actin , myosin ) | * movement (muscle proteins, actin, myosin) | ||
* defensive ( antibodies , immunoglobulins , lectins ) | * defensive (antibodies, immunoglobulins, lectins) | ||
* storage ( ferritin ) | * storage (ferritin) | ||
* sensory ( rhodopsin ) | * sensory (rhodopsin) | ||
* regulatory ( histones , hormones ) | * regulatory (histones, hormones) | ||
* nutritional (source of essential amino acids, source of nitrogen, materials for building and restoring tissues) | * nutritional (source of essential amino acids, source of nitrogen, materials for building and restoring tissues) | ||
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* fibrillar (fibrous), scleroproteins, stromal proteins (collagens, keratins, elastins) | * fibrillar (fibrous), scleroproteins, stromal proteins (collagens, keratins, elastins) | ||
# Complex proteins (contain a protein chain and a non-protein part – a prosthetic group – lipoproteins , glycoproteins ) | # Complex proteins (contain a protein chain and a non-protein part – a prosthetic group – lipoproteins, glycoproteins) | ||
* nucleoproteins ( nucleic acids ) | * nucleoproteins (nucleic acids) | ||
* lipoproteins (neutral lipids, phospholipids , sterols) | * lipoproteins (neutral lipids, phospholipids, sterols) | ||
* glycoproteins ( carbohydrates ) | * glycoproteins (carbohydrates) | ||
* phosphoproteins ( phosphoric acid ) | * phosphoproteins (phosphoric acid) | ||
* chromoproteins (derivatives of porphyrin, flavin ) | * chromoproteins (derivatives of porphyrin, flavin) | ||
* metalloproteins (coordinatively bound metals) | * metalloproteins (coordinatively bound metals) | ||
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; Soluble | ; Soluble | ||
* albumins − milk ( ''lactalbumin'' ), egg white ( ''ovalbumin, conalbumin'' ), wheat ( ''leucosin'' ) | * albumins − milk (''lactalbumin''), egg white (''ovalbumin, conalbumin''), wheat (''leucosin'') | ||
* globulins - meat ( ''myosin, actin'' ), milk ( ''lactoglobulin'' ), egg ( ''ovoglobulin'' ) | * globulins - meat (''myosin, actin''), milk (''lactoglobulin''), egg (''ovoglobulin'') | ||
* gliadins or prolamins − wheat ( ''gliadin'' ), barley ( ''hordein'' ), corn ( ''zein'' ) | * gliadins or prolamins − wheat (''gliadin''), barley (''hordein''), corn (''zein'') | ||
* glutelins − wheat ( ''glutenin'' ), rice ( ''oryzenin'' ) | * glutelins − wheat (''glutenin''), rice (''oryzenin'') | ||
* protamines - fish milk ( ''cyprimin, salmin, clupein, scombrin'' ) | * protamines - fish milk (''cyprimin, salmin, clupein, scombrin'') | ||
* histones - blood ( ''hemoglobin and myoglobin globins'' ) | * histones - blood (''hemoglobin and myoglobin globins'') | ||
; Insoluble | ; Insoluble | ||
* collagen , elastin , keratin | * collagen, elastin, keratin | ||
==== According to the status ==== | ==== According to the status ==== | ||
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{| class=" | {|width=70% style="background-color: #F0FFFF;text-align:left;margin-bottom:10px;border:1px solid #B0E2FF" | ||
|<big>Meat, meat products, poultry, fish</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Meat, meat products, poultry, fish'''</big> | ||
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=== Meat, meat products, poultry, fish === | === Meat, meat products, poultry, fish === | ||
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; In vivo response | ; In vivo response | ||
''For more detailed information, see Excitation-Contraction Coupling .'' | ''For more detailed information, see Excitation-Contraction Coupling.'' | ||
; Post mortem reaction | ; Post mortem reaction | ||
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* ~80° C oxidation of SH-groups | * ~80° C oxidation of SH-groups | ||
* ~90° C gelatinization of collagen (release of tropocollagen fibers, gelatin salt) | * ~90° C gelatinization of collagen (release of tropocollagen fibers, gelatin salt) | ||
* ~100 ° C elimination of NH 3 , H 2 S, other substances, aromatic substances, color change | * ~100 ° C elimination of NH 3, H 2 S, other substances, aromatic substances, color change | ||
=== Milk and milk products === | === Milk and milk products === | ||
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* casein | * casein | ||
** α-caseins = phosphoproteins, α S1 , α S2 , phosphoserine | ** α-caseins = phosphoproteins, α S1, α S2, phosphoserine | ||
** ß-caseins = phosphoproteins | ** ß-caseins = phosphoproteins | ||
** γ-caseins = degradation products of ß-caseins | ** γ-caseins = degradation products of ß-caseins | ||
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* microorganisms (lactic acid), acidification (pH 5.5) | * microorganisms (lactic acid), acidification (pH 5.5) | ||
* proteolytic enzyme rennin (chymosin, rennet), specific hydrolysis of κ-casein − para-κ-casein = hydrophobic part, part of micelles, κ-casein macropeptide = hydrophilic part, coagulation | * proteolytic enzyme rennin (chymosin, rennet), specific hydrolysis of κ-casein − para-κ-casein = hydrophobic part, part of micelles, κ-casein macropeptide = hydrophilic part, coagulation | ||
* curd, (storage › firmness, acidity, centrifugation of whey, salting, ripening (for Emmental type cheese, lactic conversion › propionic acid + CO 2 ), proteolysis, lipolysis › hard cheese | * curd, (storage › firmness, acidity, centrifugation of whey, salting, ripening (for Emmental type cheese, lactic conversion › propionic acid + CO 2), proteolysis, lipolysis › hard cheese | ||
==== Soft cheeses, yogurts ==== | ==== Soft cheeses, yogurts ==== | ||
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{| class=" | {|width=70% style="background-color: #F0FFFF;text-align:left;margin-bottom:10px;border:1px solid #B0E2FF" | ||
|<big>Egg</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Egg'''</big> | ||
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=== Egg === | === Egg === | ||
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{| class=" | {|width=70% style="background-color: #F0FFFF;text-align:left;margin-bottom:10px;border:1px solid #B0E2FF" | ||
|<big>Foods of plant origin</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Foods of plant origin'''</big> | ||
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=== Foods of plant origin === | === Foods of plant origin === | ||
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* no gluten | * no gluten | ||
* baking properties: pentosans, some proteins (swelling in an acidic environment) | * baking properties: pentosans, some proteins (swelling in an acidic environment) | ||
* formation of acids by microorganisms ( ''S. cerevisiae'' , ''S. minor'' , ''L. plantarum'' , ''L. brevis'' ) | * formation of acids by microorganisms (''S. cerevisiae'', ''S. minor'', ''L. plantarum'', ''L. brevis'') | ||
==== Proteins of legumes and oilseeds ==== | ==== Proteins of legumes and oilseeds ==== | ||
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* high globulin content, germination function | * high globulin content, germination function | ||
''More detailed information can be found on the amino acid content in legumes page .'' | ''More detailed information can be found on the amino acid content in legumes page.'' | ||
; Use of non-traditional protein sources | ; Use of non-traditional protein sources | ||
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{| class=" | {|width=70% style="background-color: #F0FFFF;text-align:left;margin-bottom:10px;border:1px solid #B0E2FF" | ||
|<big>Reaction</big> | |class="portaltitle sbaleno" style="background-color:white;text-align:center" | <big>'''Reaction'''</big> | ||
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=== Reaction === | === Reaction === | ||
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* elimination, isomerization, addition, oxidation | * elimination, isomerization, addition, oxidation | ||
* complex reaction | * complex reaction | ||
* influence of food composition, conditions: temperature, pH, O 2 , other substances | * influence of food composition, conditions: temperature, pH, O 2, other substances | ||
; Consequences | ; Consequences | ||
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: biologically active substances (biogenic amines) | : biologically active substances (biogenic amines) | ||
** histamine (His) , cadaverine (Lys) | ** histamine (His), cadaverine (Lys) | ||
; Elimination of ammonia and water | ; Elimination of ammonia and water | ||
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* hydrolysis of the cross-linked protein and the formation of unusual amino acids, lysinoalanine, lanthionine | * hydrolysis of the cross-linked protein and the formation of unusual amino acids, lysinoalanine, lanthionine | ||
* isomerization and formation of D-amino acids , reduced usability | * isomerization and formation of D-amino acids, reduced usability | ||
==== Addition reaction ==== | ==== Addition reaction ==== | ||
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|} | |} | ||
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<noinclude> | <noinclude> | ||
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* ''2. AMINO ACIDS, PEPTIDES, PROTEINS'' [online]. [feeling. 2012-03-10]. < <nowiki>https://el.lf1.cuni.cz/p51525121/</nowiki> >. | * ''2. AMINO ACIDS, PEPTIDES, PROTEINS'' [online]. [feeling. 2012-03-10]. < <nowiki>https://el.lf1.cuni.cz/p51525121/</nowiki> >. | ||
[[Category:Biochemistry]] |
Latest revision as of 21:53, 10 January 2024
Amino acids have:
- functional groups: NH2 COOH
- units: amino acids linked by a peptide bond
Peptides:
- 2-100 amino acids
Proteins:
- > 100 amino acids
Amino acids[edit | edit source]
Amino acids are the basic building blocks of proteins. Chemically, they are organic compounds connected to each other by a peptide bond. At least one primary amino group –NH 2 and at the same time at least one carboxyl group –COOH must be present in the amino acid. Chemically, they have substituted derivatives of carboxylic acids.
- 2–100 amino acids (monomers) – peptides
- 100 or more amino acids - proteins
More than 700 different AMKs have been demonstrated in nature. That is why we also divide AMK according to their occurrence:
- amino acids found in all living organisms
- bound in proteins (21 proteinogenic AMK), peptides or as free AMK
- amino acids found only in some organisms
- bound in peptides or as free AMK
- they are not components of proteins
Proteinogenic amino acids, or coded ones, occur in proteins as L-alpha-amino acids (the exception is glycine). This is due to the chemical arrangement that is necessary for biogenic function. Specific types of amino acids, their sequence and spatial structure then give proteins their biological properties.
Structure[edit | edit source]
- amino group (-NH 2, free, substituted)
- carboxyl group (-COOH)
- other functional groups
Classification[edit | edit source]
- according to the structure of the side chain and functional groups
- according to side chain polarity
- polar
- non-polar
- according to importance in human nutrition
- essential = the human organism is unable to create them endogenously
- valine, leucine, isoleucine, phenylalanine, lysine, methionine, tryptophan, threonine
- conditionally essential = essential in the absence of precursors or immaturity of enzymatic systems
- arginine, histidine
- completely non-essential
- glycine, alanine, serine, cysteine, aspartic acid and asparagine, glutamic acid and glutamine, selenocysteine, tysorine, proline
- essential = the human organism is unable to create them endogenously
Classification | |
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Representatives | |
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Physico-chemical properties | ||||||||||
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Peptides[edit | edit source]
Structure[edit | edit source]
- condensation (amino acids -› peptides)
- binding of some amino acids in an unusual way (Glu distal group COOH = γ-peptide bond)
- bound D-amino acids
- unusual amino acids bound
- ß-alanine (3-aminopropionic), α-aminobutyric (2-aminobutyric), γ-aminobutyric (4-aminobutyric), taurine , 2-aminoacrylic (dehydroalanine), (E)-2-aminocrotonic (dehydrobutyrin), pyroglutamic
Classification[edit | edit source]
Number of bound monomers (amino acids)
- oligopeptides (2–10 amino acids)
- polypeptides (formerly macropeptides, 11–100 amino acids)
String type
- linear
- cyclical
type of bonds
- homodet (peptide bonds only)
- heterodet (peptide and other bonds)
- disulfide -SS-, ester (depsipeptides) -CO-OR
Bound folders
- homeomeric containing only amino acids
- heteromeric (peptoids) containing also other compounds
- nucleopeptides - phosphopeptides
- lipopeptides – chromopeptides
- glycopeptides – metallopeptides
Occurrence[edit | edit source]
- products of metabolism, natural peptides
- products of proteolysis, enzymatic or non-enzymatic hydrolysis
- synthetic peptides, substitute sweeteners
Properties[edit | edit source]
- biological activity
- sensory properties
- products of metabolism of lactic acid bacteria = bacteriocins
- nisin (Streptococcus cremoris, syn. Lactococcus lactis ssp. Lactis)
- preservative, stabilization of fermented products
Significant peptides[edit | edit source]
Glutathione[edit | edit source]
(G-SH or GSSG) γ-L-glutamyl-L-cysteinylglycine (γ-amide bond)
Occurrence
- microorganisms, plants, animals
- wheat flour (10-15 mg/kg)
- meat (300-1500 mg/kg)
Function
- detoxification of toxic forms of oxygen
- transport (transfer) of amino acids into cells
- metabolic processes (leukotriene biosynthesis)
- stabilization of the oxidation state of SH-proteins (substrate of peroxidase, glutathione reductase)
- technology
Chorleywood method of making white bread, ascorbic acid
- H 2 A + ½ O 2 → A + H 2 O (ascorbate)
- A + 2 G-SH → H 2 A + GSSG (glutathione dehydrogenase)
- GSSG – without influence on the rheological properties of the dough
- G-SH – negative influence (gluten protein depolymerization)
- PSSP + G-SH → PSSG + P-SH
β-alanylhistidine dipeptides[edit | edit source]
- carnosine , anserine , balenin
Occurrence
- in meat
Function
- participation in skeletal muscle contraction
- buffering capacity of the muscle
- organoleptic properties
Proteolysis products
- spontaneous proteolysis (autolysis)
- desired maturation of meat (consistency, aroma), production of yeast autolysates (additives)
- undesirable
- intentional proteolysis
- cheese production (desired consistency, aroma)
- production of malt (stabilization of beer foam)
- production of protein hydrolysates
- enzymatic:
- soy sauce
- hydrolysates of waste proteins (blood, whey, caseins)
- sour: soup spices, etc. preparations
- enzymatic:
Bitter peptides of enzyme hydrolysates and foods[edit | edit source]
- hydrophobic amino acids: Val, Leu, Ile, Phe, Tyr, Trp (M < 6000 Da)
Synthetic peptides[edit | edit source]
- substitute sweetener Aspartame (Asp-Phe)
Proteins[edit | edit source]
Proteins, or polypeptides, are organic macromolecular substances. Their molecular weight exceeds 10,000. They consist of more than 100 amino acids. A typical protein contains 200-300 of them.
Building[edit | edit source]
peptide bond The amino acids in a peptide are linked to each other by a peptide bond. A peptide bond connects the amino group of one amino acid and the carboxyl group of another amino acid by a simple covalent bond. The value of the Gibbson energy of this reaction is equal to G = 10 kJ/mol.
Polycondensation creates an arbitrarily long chain of amino acids. The end of the chain that has a free (unreacted) amino group is called the N-terminus. On the opposite side of the chain we find a free carboxyl group. This end is called the C-end.
Structure[edit | edit source]
The structure of proteins is based on the arrangement of amino acids in the chain. The structure of proteins is very important for their function.
- Primary structure
The primary structure is defined by the exact order of the amino acids in the chain.
- Secondary structureα-helix
β-folded sheet
By secondary structure we mean the spatial arrangement of amino acids in the chain and stabilization by hydrogen bridges.
- There are two basic secondary structures:
- α-helix: The chain is twisted into a right-handed helix. The length of one turn of the helix is equal to 3.6 amino acid residues. The α-helix structure can be found mainly in fibrous proteins (keratins) or muscle proteins.
- β-folded sheet: Two parallel and antiparallel arranged chains resembling a folded sheet of paper.
- Tertiary structure
Tertiary structure is characterized by additional intramolecular bonding interactions. For example, disulfide bonds, ionic bonds and van der Waals forces. Additional H-bonds can also form in the molecule.
- Quaternary structure
Quaternary structure occurs in proteins that consist of two or more polypeptide chains. Their connection is ensured by mutual extramolecular bonding interactions. Quaternary structure can be found, for example, in hemoglobin. Conversely, myoglobin does not have a quaternary structure.
Denaturation of proteins[edit | edit source]
Protein denaturation is a process where the secondary and tertiary structure changes. The protein thus loses its biological activity. Denaturation can be achieved, for example, by heating or changing the pH.
Major nutrients[edit | edit source]
- peptide bonds
- other bonds
- disulfide -SS-
- ester
- amides
- components other than amino acids (physically or chemically)
- water
- inorganic ions
- lipids, sugars, nucleic acids, colored compounds
Classification | |
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Meat, meat products, poultry, fish | |
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Egg | |
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Foods of plant origin | |
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Reaction | |
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Links[edit | edit source]
Related articles[edit | edit source]
Source[edit | edit source]
- 2. AMINO ACIDS, PEPTIDES, PROTEINS [online]. [feeling. 2012-03-10]. < https://el.lf1.cuni.cz/p51525121/ >.